Central Data Repository with Data Warehousing

Note: This recipe is in a pre-release alpha stage. It's usable but do so at your own risk.

This recipe sets up an HIE that does the following:

• Accept FHIR bundles submitted securely through an IOL (OpenHIM)

• Stores Clinical FHIR data to a FHIR store (HAPI FHIR)

• Stores Patient Demographic data to an MPI (JeMPI)

• Pushes FHIR resources to Kafka for the reporting pipeline (and other systems) to use

• Pulls FHIR data out of Kafka and maps it to flattened tables in the Data Warehouse (Clickhouse)

• Allows for the Data Warehouse data to be visualised via a BI tool (Apache Superset)

To launch this package in dev mode copy and paste this into your terminal in a new folder (ensure you have the instant CLI installed):

wget https://raw.githubusercontent.com/jembi/platform/main/cdr-dw.env && \
wget https://raw.githubusercontent.com/jembi/platform/main/config.yaml && \
instant package init -p cdr-dw --dev

Services

When deployed in --dev mode the location of the UIs will be as follows:

Service	URL	Auth
OpenHIM	http://localhost:9000/	Test SSO user: u: test p: dev_password_only
JeMPI	http://localhost:3033/	Test SSO user: u: test p: dev_password_only
Superset	http://localhost:8089/	Test SSO user: u: test p: dev_password_only
Grafana	http://localhost:3000/	Test SSO user: u: test p: dev_password_only
Keycloak	http://localhost:9088/admin/master/console/#/platform-realm	u: admin p: dev_password_only

Extra UIs only exposed in --dev mode:

Service	URL	Auth
Kafdrop	http://localhost:9013/	none
HAPI FHIR	http://localhost:3447/	none

Example use

Use the following example postman collection to see interaction you cna have with the system and see how the system reacts.

OpenHIM Platform example | Jembi PublicPostman